RNAmediator.ConstraintPLFold.check_raw_existing

RNAmediator.ConstraintPLFold.check_raw_existing(sid, unconstrained, cons, region, window, span, temperature, outdir, rawentry=None)

Check if output file from unconstrained folding exists

Parameters:

• sid (str Id for Sequence) –

• unconstrained (str Infix for ouput files of unconstrained folding) –

• cons (str Id od constraint) –

• region (int -u Option of RNAplfold) –

• window (int Size of window to fold) –

• span (int Maximum base-pair span to be evaluated) –

• temperature (float Temperature) –

• outdir (str Location of the Outpu directory. If it is an empty string os.cwd() is used) –

• rawentry (str Name for raw file to pass to write_unconstraint) –

Returns:

Bool

Return type:

True/False if file exists/not