RNAmediator.GenerateBigWig

Functions

add_chrstr(chrom, chromstr[, limit])
apply_args_and_kwargs(fn, args, kwargs)	Applies args and kwargs
create_bw_entries(fname, goi, gstrand, gs, ...)	Create entries for BigWig files
equalize_lists(listoflists[, id])
fill_array(out, which, orient, chroms, ...)
generate_bws(goi, filelist, chrom, gs, ge, ...)	Generate BigWig entries
getfiles(name, window, span, temperature, goi)	Retrieve files following specified pattern
main([args])	Main process, prepares run_settings dict, creates logging process queue and worker processes for folding, calls screen_genes
read_chromsize(cs[, chromstr, limit])	Read chromosome sizes from file
rec_dd()
scan_input(queue, configurer, level, pat, ...)	Scan input for files of interest
sortout(outlist)	Sort List of nested dicts
starmap_with_kwargs(pool, fn, args_iter, ...)	Adds kwargs to starmap
writebws(outlist, listofbws, filepaths)	Write BigWig entries to file